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BaseInfo

ncRNA ID	novel_bna_miR1384
Species	Brassica napus
Class	miRNA
Genome position	ChrC2:44677233-44677442 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527229
Length	24
Mature sequence(if miRNA)	1 - AGAGCAUGAUUAAUGGGAAGUUCU - 24
Stem-loop(if miRNA)	--                GAA       U              UA                  C                   -       C          AUA   AGAGCAUGAUUAAUGG   GUUCUUA GAUGAGGUUCUUAG  GAAUAUAAGAAACCGUUU UUAACUUUUAACUAAAAAA CUAAGAA CGGUUCUUAA   U   ||||||||||||||||   ||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||   C   UCUCGUACUAAUUACC   CAAGAAU CUACUCCAAGAAUC  CUUAUAUUCUUUGGCAGA AAUUGAAAAUUGAUUUUUU GAUUCUU GCCGAGAAUU   U AA                ACC       C              GC                  U                   U       A          CAU
Stem-loop sequence	AGAGCAUGAUUAAUGGGAAGUUCUUAUGAUGAGGUUCUUAGUAGAAUAUAAGAAACCGUUUCUUAACUUUUAACUAAAAAACUAAGAACCGGUUCUUAAAUAUCUUACUUAAGAGCCGAUUCUUAGUUUUUUUAGUUAAAAGUUAAUAGACGGUUUCUUAUAUUCCGCUAAGAACCUCAUCCUAAGAACCCACCAUUAAUCAUGCUCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013830748.1	ncRNA:24   UCUUGAAGGGUAAUUAGUACGAGA   1   ||||||||||||||||||||*||* targets:60   AGAACUUCCCAUUAAUCAUGGUCC   83 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X2, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013830747.1	ncRNA:24   UCUUGAAGGGUAAUUAGUACGAGA   1   ||||||||||||||||||||*||* targets:60   AGAACUUCCCAUUAAUCAUGGUCC   83 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X1, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013888792.1	ncRNA:24   UCUUGAAGGGUAAUUAGUACGAGA   1   |||||*||**|||||||||||||| targets:1858   AGAACCUCGGAUUAAUCAUGCUCU   1881 Target Full Sequence	3.0	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106446953), mRNA	UDP-glycosyltransferase 71B5-like(LOC106446953)	coding protein	psRNATarget
XM_013817285.1	ncRNA:24   UCUUGAAGGGUAAUUAGUACGAGA   1   |||||*||**|||||||||||||| targets:2904   AGAACCUCGGAUUAAUCAUGCUCU   2927 Target Full Sequence	3.0	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106377115), mRNA	UDP-glycosyltransferase 71B5-like(LOC106377115)	coding protein	psRNATarget