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BaseInfo

ncRNA ID novel_bna_miR1383
Species Brassica napus
Class miRNA
Genome position ChrC1:10252765-10252819 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527229
Length 24
Mature sequence(if miRNA) 32 - AGACGGUUCUUAACUUUUCUUAGA - 55
Stem-loop(if miRNA) --    G                  AU
  AGAC GUUCUUAACUUUUCUUAG  C
  |||| ||||||||||||||||||  U
  UCUG CAAGAAUUGAAAAGAAUC  U
UC    A                  AA
Stem-loop sequence AGACGGUUCUUAACUUUUCUUAGAUCUUAACUAAGAAAAGUUAAGAACAGUCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013866365.1
ncRNA:24   AGAUUCUUUUCAAUUCUUGGCAGA   1
  *|||||||||||||||||||||||
targets:595   GCUAAGAAAAGUUAAGAACCGUCU   618

0.0 PREDICTED: Brassica napus uncharacterized LOC106425644 (LOC106425644), mRNA uncharacterized LOC106425644(LOC106425644) coding protein psRNATarget