ncRNA ID | novel_bna_miR1380 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA5:14489668-14489823 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 24 |
Mature sequence(if miRNA) | 133 - AUUAUAGAGGUAUACAUUGGAGCA - 156 |
Stem-loop(if miRNA) |
--                                     A              A  --    GCUA         C  A   CUCCAAUGUAUGCCUCUAUAAUAGAGUUUCUCUAUUU UAGGGAAAAAUAUA AG  AUUU    UUUUUAUCU UA A   ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||    ||||||||| ||   GAGGUUACAUAUGGAGAUAUUAUCUCAAAGAGAUAAA AUCUCUUUUUAUAU UC  UAGA    AAAAAUGGA AU U AC                                     -              C  CU    -AUA         A  A |
Stem-loop sequence | CUCCAAUGUAUGCCUCUAUAAUAGAGUUUCUCUAUUUAUAGGGAAAAAUAUAAAGAUUUGCUAUUUUUAUCUCUAAAUAUAAAGGUAAAAAAUAAGAUUCCUCUAUAUUUUUCUCUAAAAUAGAGAAACUCUAUUAUAGAGGUAUACAUUGGAGCA |