ncRNA ID | novel_bna_miR1374 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:7684786-7684997 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527229 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGUCUAGGAUUUGGUUUAGGAUAU - 24 |
Stem-loop(if miRNA) |
--AC        C                       A        C           UC  UAU C    CC -     A                      U   GU     CCUAAACC AAAUCCUAGAUCCUAAAUCCAAA UGUAUACC UAAACCCAAAU  UA   C UAAA  C AAACC UAAACCCUAAACCCAAACCUUA AGC  C     |||||||| ||||||||||||||||||||||| |||||||| |||||||||||  ||   | ||||  | ||||| |||||||||||||||||||||| |||     GGAUUUGG UUUAGGAUCUGGGAUUUGGGUUU GCAUAUGG AUUUGGGUUUA  AU   G AUUU  G UUUGG AUUUGGGAUUUGGGUUUGGGAU UUG  U UAUA        -                       G        U           GA  -CU A    AA A     C                      -   GA |
Stem-loop sequence | ACCCUAAACCCAAAUCCUAGAUCCUAAAUCCAAAAUGUAUACCCUAAACCCAAAUUCUAUAUCCUAAACCCAAACCAUAAACCCUAAACCCAAACCUUAUAGCGUCUAGGUUUAGGGUUUGGGUUUAGGGUUUACGGUUUAGAAUUUAAGUCUAAGAUUUGGGUUUAUGGUAUACGGUUUGGGUUUAGGGUCUAGGAUUUGGUUUAGGAUAU |