ncRNA ID | novel_bna_miR1373 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA5:7781032-7781188 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACUUAUAAUUAAGUCGUCUGU - 21 |
Stem-loop(if miRNA) |
--                    U                               A             A   -U   UA   ACUUAUAAUUAAGUCGUCUG AAAGUCUUCCAGCUGGAUGACUUAGUAGAAG CUUAUAAUUAAGU GUC  GGA  G   |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||  |||   UGAAUAUUAAUUCAGCAGAC UUUCAGAAGGUCGACCUACUGAAUCAUCUUC GAAUAUUAAUUCA CAG  CCU  U UC                    C                               G             G   CC   UC |
Stem-loop sequence | ACUUAUAAUUAAGUCGUCUGUAAAGUCUUCCAGCUGGAUGACUUAGUAGAAGACUUAUAAUUAAGUAGUCUGGAUAGUCUUCCCCGACGACUUAAUUAUAAGGCUUCUACUAAGUCAUCCAGCUGGAAGACUUUCCAGACGACUUAAUUAUAAGUCU |