Search result

BaseInfo

ncRNA ID	novel_bna_miR1371
Species	Brassica napus
Class	miRNA
Genome position	ChrA4:31093934-31094095 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495
Length	24
Mature sequence(if miRNA)	1 - AUAGAGUGAACCAUUAGAGCAAAU - 24
Stem-loop(if miRNA)	--                                AU                       A                  CAA   UUGCUCUAAUGGUUUACUCUAUAAUAGAGUUA  CUAUAAUGGAGUGAAAUAUAGAG AAUGUUGUUUUUUUACUC   A   ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||   AACGAGAUUACCAAGUGAGAUAUUAUCUCAAU  GAUAUUAUUUCACUUUAUAUCUC UUACAACAAAAAAAUGAG   U UA                                AU                       C                  AUA
Stem-loop sequence	UUGCUCUAAUGGUUUACUCUAUAAUAGAGUUAAUCUAUAAUGGAGUGAAAUAUAGAGAAAUGUUGUUUUUUUACUCCAAAUAUAGAGUAAAAAAACAACAUUCCUCUAUAUUUCACUUUAUUAUAGUAUAACUCUAUUAUAGAGUGAACCAUUAGAGCAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013814157.1	ncRNA:24   UAAACGAGAUUACCAAGUGAGAUA   1   =||--||||=|*|||||||||||| targets:141   GUU--CUCUGAAGGUUCACUCUAU   162 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106374054 (LOC106374054), mRNA	uncharacterized LOC106374054(BNACNNG27410D)	coding protein	psRNATarget