ncRNA ID | novel_bna_miR1369 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:7563907-7564023 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527228 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GUGGGCUUUUAAGAAGACGUU - 21 |
Stem-loop(if miRNA) |
--     CUU              C            ---GA GAGUUACAACAAGAGUA   GUGGG   UUAAGAAGACGUUU AUUGAGUAAUCC     C                 U   |||||   |||||||||||||| ||||||||||||     |   CACUC   AAUUCUUCUGCAAA UAACUCAUUAGG     G                 U AA     AAU              A            GAAAA AAGAGCAAAAACAUGGU |
Stem-loop sequence | GUGGGCUUUUAAGAAGACGUUUCAUUGAGUAAUCCGACGAGUUACAACAAGAGUAUUUGGUACAAAAACGAGAAGAAAAGGGAUUACUCAAUAAAACGUCUUCUUAAUAACUCACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013881536.1 |
|
2.5 | PREDICTED: Brassica napus 10 kDa chaperonin (LOC106439968), mRNA | 10 kDa chaperonin(LOC106439968) | coding protein | psRNATarget |