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BaseInfo

ncRNA ID	novel_bna_miR1364
Species	Brassica napus
Class	miRNA
Genome position	ChrA9:19299421-19299587 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527228
Length	21
Mature sequence(if miRNA)	147 - AGAGCAUGAUUAACCCGAGAU - 167
Stem-loop(if miRNA)	--   G             A A    A   AC   U                               -U    GAACCGGUUUU   AGA CAUGAUUAACCCG G UUCU AGG  GAG UUCUUAGCGAAAGUUAAGAAACUGUUUCUUA  UUAA           U   ||| ||||||||||||| | |||| |||  ||| |||||||||||||||||||||||||||||||  ||||           A   UCU GUACUAAUUGGGC C AAGA UCU  CUC AAGAAUUGCUUUUAAUUCUUUGACAAAGAAU  AAAA           A AU   G             - C    A   CA   U                               UG    UUGAAUUUUUU
Stem-loop sequence	AGAGCAUGAUUAACCCGAGAUUCUAAGGACGAGUUUCUUAGCGAAAGUUAAGAAACUGUUUCUUAUUUAAGAACCGGUUUUUAAUUUUUUAAGUUAAAAGUUAAGAAACAGUUUCUUAAUUUUCGUUAAGAAUCUCACUCUAAGAACCCGGGUUAAUCAUGGUCUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013817285.1	ncRNA:21   UAGAGCCCAAUUAGUACGAGA   1   |*|||||*||||||||||||| targets:2907   ACCUCGGAUUAAUCAUGCUCU   2927 Target Full Sequence	1.0	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106377115), mRNA	UDP-glycosyltransferase 71B5-like(LOC106377115)	coding protein	psRNATarget
XM_013888792.1	ncRNA:21   UAGAGCCCAAUUAGUACGAGA   1   |*|||||*||||||||||||| targets:1861   ACCUCGGAUUAAUCAUGCUCU   1881 Target Full Sequence	1.0	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106446953), mRNA	UDP-glycosyltransferase 71B5-like(LOC106446953)	coding protein	psRNATarget
XM_013871330.1	ncRNA:21   UAGAGCCCAAUUAGUACGAGA   1   *|=|=|||||||||||||||| targets:1370   UUUUUGGGUUAAUCAUGCUCU   1390 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106430539 (LOC106430539), mRNA	uncharacterized LOC106430539(LOC106430539)	coding protein	psRNATarget
XM_013817494.1	ncRNA:21   UAGAGCCCAAUUAGUACGAGA   1   *|||*|||*|||||||||||| targets:960   UUCUAGGGAUAAUCAUGCUCU   980 Target Full Sequence	2.5	PREDICTED: Brassica napus V-type proton ATPase subunit a2-like (LOC106377294), mRNA	V-type proton ATPase subunit a2-like(LOC106377294)	coding protein	psRNATarget
XM_013844172.1	ncRNA:21   UAGAGCCCAAUUAGUACGAGA   1   |*|*|||||||||||||*||| targets:14   ACCCCGGGUUAAUCAUGGUCU   34 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106403330 (LOC106403330), mRNA	uncharacterized LOC106403330(LOC106403330)	coding protein	psRNATarget
XM_013812488.1	ncRNA:19   GAGCCCAAUUAGUACGAGA   1   |*|||||||||||||*||| targets:1   CCCGGGUUAAUCAUGGUCU   19 Target Full Sequence	2.5	PREDICTED: Brassica napus putative uncharacterized protein DDB_G0289963 (LOC106372309), transcript variant X1, mRNA	putative uncharacterized protein DDB_G0289963(LOC106372309)	coding protein	psRNATarget
XM_013812489.1	ncRNA:19   GAGCCCAAUUAGUACGAGA   1   |*|||||||||||||*||| targets:1   CCCGGGUUAAUCAUGGUCU   19 Target Full Sequence	2.5	PREDICTED: Brassica napus putative uncharacterized protein DDB_G0289963 (LOC106372309), transcript variant X2, mRNA	putative uncharacterized protein DDB_G0289963(LOC106372309)	coding protein	psRNATarget