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BaseInfo

ncRNA ID	ath-miRf10681-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - AAUCCCCCGCAAAUUGCGAGG - NA
Stem-loop(if miRNA)	CC    A          C      -   GCGUAGUAAUUCCCACGCAAAGCUGU GUCCCUCGUAAAUCCC  GCAA UUGCGAGGGA UUGCGU GGG                          A ||||||||||||||||  |||| |||||||||| |||||| |||                          G CAGGGAGCGUUUGGGG  CGUU AACGCUCCCU AAUGCU CUU                          G                 AU    A          A      G   AUGUGCGAAGGAGCAUUCACACAUUG
Stem-loop sequence	GUCCCUCGUAAAUCCCCCGCAAAUUGCGAGGGACUUGCGUGGGGCGUAGUAAUUCCCACGCAAAGCUGUAGGGUUACACACUUACGAGGAAGCGUGUAUUCGUCGUAAAUCCCUCGCAAAUUGCUAGGGGUUUGCGAGGGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY079037.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:630   CCUCUCAAUUUGUGGGGGAUU   650 Target Full Sequence	2.5	Arabidopsis thaliana At2g33120/F25I18.14 mRNA, complete cds	NA	coding protein	psRNATarget
AY114706.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:630   CCUCUCAAUUUGUGGGGGAUU   650 Target Full Sequence	2.5	Arabidopsis thaliana putative synaptobrevin (At2g33120) mRNA, complete cds	NA	coding protein	psRNATarget
AY128288.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:768   CCUCUCAAUUUGUGGGGGAUU   788 Target Full Sequence	2.5	Arabidopsis thaliana At2g33120/F25I18.14 mRNA, complete cds	NA	coding protein	psRNATarget
AF419564.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:768   CCUCUCAAUUUGUGGGGGAUU   788 Target Full Sequence	2.5	Arabidopsis thaliana At2g33120/F25I18.14 mRNA, complete cds	NA	coding protein	psRNATarget
AK317447.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:795   CCUCUCAAUUUGUGGGGGAUU   815 Target Full Sequence	2.5	Arabidopsis thaliana AT2G33120 mRNA, complete cds, clone: RAFL25-37-C13	NA	coding protein	psRNATarget
M90418.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:762   CCUCUCAAUUUGUGGGGGAUU   782 Target Full Sequence	2.5	Arabidopsis thaliana synaptobrevin-related protein (SAR1) mRNA, complete cds	NA	coding protein	psRNATarget
AY072422.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:771   CCUCUCAAUUUGUGGGGGAUU   791 Target Full Sequence	2.5	Arabidopsis thaliana putative synaptobrevin (At2g33120) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001202735.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:742   CCUCUCAAUUUGUGGGGGAUU   762 Target Full Sequence	2.5	Arabidopsis thaliana synaptobrevin-related protein 1 (SAR1), mRNA	synaptobrevin-related protein 1(SAR1)	coding protein	psRNATarget
AY086363.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:836   CCUCUCAAUUUGUGGGGGAUU   856 Target Full Sequence	2.5	Arabidopsis thaliana clone 2443 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_001036392.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:860   CCUCUCAAUUUGUGGGGGAUU   880 Target Full Sequence	2.5	Arabidopsis thaliana synaptobrevin-related protein 1 (SAR1), mRNA	synaptobrevin-related protein 1(SAR1)	coding protein	psRNATarget
NM_128872.3	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|||||||=|||||||| targets:988   CCUCUCAAUUUGUGGGGGAUU   1008 Target Full Sequence	2.5	Arabidopsis thaliana synaptobrevin-related protein 1 (SAR1), mRNA	synaptobrevin-related protein 1(SAR1)	coding protein	psRNATarget
BT006042.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|*=||||||||||||| targets:825   CCUCUCUGUUUGCGGGGGAUU   845 Target Full Sequence	3.0	Arabidopsis thaliana putative synaptobrevin protein (At2g32670) mRNA, complete cds	NA	coding protein	psRNATarget
AK118318.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|*=||||||||||||| targets:889   CCUCUCUGUUUGCGGGGGAUU   909 Target Full Sequence	3.0	Arabidopsis thaliana At2g32670 mRNA for putative synaptobrevin, complete cds, clone: RAFL19-59-P17	NA	coding protein	psRNATarget
BX819808.1	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|*=||||||||||||| targets:851   CCUCUCUGUUUGCGGGGGAUU   871 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_128826.4	ncRNA:21   GGAGCGUUAAACGCCCCCUAA   1   ||||*|*=||||||||||||| targets:889   CCUCUCUGUUUGCGGGGGAUU   909 Target Full Sequence	3.0	Arabidopsis thaliana vesicle-associated membrane protein 725 (VAMP725), mRNA	vesicle-associated membrane protein 725(VAMP725)	coding protein	psRNATarget