ncRNA ID | novel_bna_miR1351 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC8:18219667-18219770 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR524726 |
Length | 21 |
Mature sequence(if miRNA) | 84 - UAAGAACUCCACCCUAAGAAA - 104 |
Stem-loop(if miRNA) |
--        C               A            UU CU       A   UCUUAGGG GGGGUUCUUAGGAAA UAUAAGAAAUUG  A  UUAAGAA C   |||||||| ||||||||||||||| ||||||||||||  |  ||||||| U   AGAAUCCC CCUCAAGAAUCCUUU AUAUUUUUUGAU  U  AAUUCUU G AA        A               -            UU UC       U |
Stem-loop sequence | UCUUAGGGCGGGGUUCUUAGGAAAAUAUAAGAAAUUGUUACUUUAAGAAACUGUUUCUUAACUUUUUAGUUUUUUAUAUUUCCUAAGAACUCCACCCUAAGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013829109.1 |
|
0.0 | PREDICTED: Brassica napus disease resistance protein TAO1-like (LOC106388935), mRNA | disease resistance protein TAO1-like(LOC106388935) | coding protein | psRNATarget | |||||||||
XM_013804174.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106364642 (LOC106364642), mRNA | uncharacterized LOC106364642(BNAC05G23510D) | coding protein | psRNATarget |