ncRNA ID | novel_bna_miR1342 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA10:8685936-8686030 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUAGAGUAGAAAAUAGAGUGAUA - 23 |
Stem-loop(if miRNA) |
--                              ------------------         UUAUUCUAUUUUUUACUCUAAAAUAGAGUA                  ACUCUAU   ||||||||||||||||||||||||||||||                  ||||||A   AGUGAGAUAAAAGAUGAGAUUUUAUCUCAU                  UGAGAUA AU                              AGUAACUUCAUUUAAAUU       |
Stem-loop sequence | UUAUUCUAUUUUUUACUCUAAAAUAGAGUAACUCUAUAAUAGAGUUUAAAUUUACUUCAAUGAUACUCUAUUUUAGAGUAGAAAAUAGAGUGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013841080.1 |
|
1.0 | PREDICTED: Brassica napus phosphoinositide phosphatase SAC1-like (LOC106400708), mRNA | phosphoinositide phosphatase SAC1-like(LOC106400708) | coding protein | psRNATarget |