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BaseInfo

ncRNA ID novel_bna_miR1338
Species Brassica napus
Class miRNA
Genome position ChrA9:18749990-18750130 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR524726
Length 21
Mature sequence(if miRNA) 121 - GGAAUGUAUAAUCAAAUCCCU - 141
Stem-loop(if miRNA) --           -AAACC  AAG                                        G  AAAC
  GGAUUUGAUUA      CC   UUCCUCGGAAUUUCCUCGGAAUUUUCCGAGGGAAUUCCGA GA    U
  |||||||||||      ||   |||||||||||||||||||||||||||||||||||||||| ||    C
  CCUAAACUAAU      GG   AAGGAGCCUUAAAGGAGCCUUAAAAGGCUCCUUUAAGGCU CU    U
UC           AUGUAA  -AA                                        G  GCUA
Stem-loop sequence GGAUUUGAUUAAAACCCCAAGUUCCUCGGAAUUUCCUCGGAAUUUUCCGAGGGAAUUCCGAGGAAAACUCUAUCGUCGUCGGAAUUUCCUCGGAAAAUUCCGAGGAAAUUCCGAGGAAAAGGAAUGUAUAAUCAAAUCCCU