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BaseInfo

ncRNA ID novel_bna_miR1333
Species Brassica napus
Class miRNA
Genome position ChrA9:30950592-30950742 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR524726
Length 23
Mature sequence(if miRNA) 1 - AAGGUUCUUAGUAGAAUAUAACA - 23
Stem-loop(if miRNA) --A           A        C              C             AC                     
   AGGUUCUUAGU GAAUAUAA AAACCGUCUCUUAA UUUUAACUAAAAA  CUAAGAACCGGUUCUUAAAUAU
   ||||||||||| |||||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||U
   UCCAAGAAUCA CUUAUAUU UUUGGCAGAGAAUU AAAAUUGAUUUUU  GAUUCUUGGCCGAGAAUUUAUU
CAC           C        C              U             CC                     
Stem-loop sequence AAGGUUCUUAGUAGAAUAUAACAAACCGUCUCUUAACUUUUAACUAAAAAACCUAAGAACCGGUUCUUAAAUAUUUUAUUUAAGAGCCGGUUCUUAGCCUUUUUAGUUAAAAUUUAAGAGACGGUUUCUUAUAUUCCACUAAGAACCUCAC