ncRNA ID | novel_bna_miR1333 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:30950592-30950742 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR524726 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAGGUUCUUAGUAGAAUAUAACA - 23 |
Stem-loop(if miRNA) |
--A           A        C              C             AC                         AGGUUCUUAGU GAAUAUAA AAACCGUCUCUUAA UUUUAACUAAAAA  CUAAGAACCGGUUCUUAAAUAU    ||||||||||| |||||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||U    UCCAAGAAUCA CUUAUAUU UUUGGCAGAGAAUU AAAAUUGAUUUUU  GAUUCUUGGCCGAGAAUUUAUU CAC           C        C              U             CC                      |
Stem-loop sequence | AAGGUUCUUAGUAGAAUAUAACAAACCGUCUCUUAACUUUUAACUAAAAAACCUAAGAACCGGUUCUUAAAUAUUUUAUUUAAGAGCCGGUUCUUAGCCUUUUUAGUUAAAAUUUAAGAGACGGUUUCUUAUAUUCCACUAAGAACCUCAC |