ncRNA ID | novel_bna_miR1331 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA6:1106919-1107025 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR524726 |
Length | 21 |
Mature sequence(if miRNA) | 87 - UAAGAACUCCACCCUAAGAAA - 107 |
Stem-loop(if miRNA) |
-- C AA C U UCUUAGGG GGAGUUCUUAGG AAUAUAAGAAACUGUUUCUUAA UUUU A |||||||| |||||||||||| |||||||||||||||||||||| |||| G AGAAUCCC CCUCAAGAAUCC UUAUAUUUUUUGACAAAGAAUU AAAG U AA A CC A U |
Stem-loop sequence | UCUUAGGGCGGAGUUCUUAGGAAAAUAUAAGAAACUGUUUCUUAACUUUUUAGUUGAAAAUUAAGAAACAGUUUUUUAUAUUCCCCUAAGAACUCCACCCUAAGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013829109.1 |
|
0.0 | PREDICTED: Brassica napus disease resistance protein TAO1-like (LOC106388935), mRNA | disease resistance protein TAO1-like(LOC106388935) | coding protein | psRNATarget | |||||||||
XM_013804174.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106364642 (LOC106364642), mRNA | uncharacterized LOC106364642(BNAC05G23510D) | coding protein | psRNATarget |