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BaseInfo

ncRNA ID novel_bna_miR1326
Species Brassica napus
Class miRNA
Genome position ChrA4:8936179-8936234 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR521271
Length 24
Mature sequence(if miRNA) 1 - AAAUCGUCGGUAUGUCAUCGGAAU - 24
Stem-loop(if miRNA) --AAA             A        A
     UCGUCGGUAUGUC UCGGAAUA C
     ||||||||||||| ||||||||
     AGCAGCCAUACAG AGCCUUAU G
CACAA             C        U
Stem-loop sequence AAAUCGUCGGUAUGUCAUCGGAAUAACGUUAUUCCGACGACAUACCGACGAAACAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013824962.1
ncRNA:24   UAAGGCU--ACUGUAUGGCUGCUAAA   1
  |||--||--|||||||||||||||||
targets:3   AUU--GAAGUGACAUACCGACGAUUU   26

2.5 PREDICTED: Brassica napus mitochondrial import receptor subunit TOM5 homolog (LOC106385024), mRNA mitochondrial import receptor subunit TOM5 homolog(LOC106385024) coding protein psRNATarget
XM_013824921.1
ncRNA:24   UAAGGCU--ACUGUAUGGCUGCUAAA   1
  |||--||--|||||||||||||||||
targets:42   AUU--GAAGUGACAUACCGACGAUUU   65

2.5 PREDICTED: Brassica napus mitochondrial import receptor subunit TOM5 homolog (LOC106384990), mRNA mitochondrial import receptor subunit TOM5 homolog(LOC106384990) coding protein psRNATarget