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BaseInfo

ncRNA ID novel_bna_miR1320
Species Brassica napus
Class miRNA
Genome position ChrA10:14148655-14148710 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 24
Mature sequence(if miRNA) 1 - AAGAGAAUAUUAGAAUUUGGUGUG - 24
Stem-loop(if miRNA) --G  UU          AG        U
   AU  AAUUUUAGUG  UUUUUAGA G
   ||  ||||||||||  ||||||||
   UG  UUAAGAUUAU  GAGAAUUU A
GUG  GU          AA        U
Stem-loop sequence GAUUUAAUUUUAGUGAGUUUUUAGAUGAUUUUAAGAGAAUAUUAGAAUUUGGUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013845258.1
ncRNA:24   GUGUGGUUUAAGAUUAUAAGAGAA   1
  =**|||||||*|||||*|||||||
targets:135   UUAACCAAAUGCUAAUUUUCUCUU   158

2.5 PREDICTED: Brassica napus uncharacterized protein At5g08430-like (LOC106404537), mRNA uncharacterized protein At5g08430-like(LOC106404537) coding protein psRNATarget