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BaseInfo

ncRNA ID	novel_bna_miR1317
Species	Brassica napus
Class	miRNA
Genome position	ChrC6:38397263-38397318 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR521271
Length	22
Mature sequence(if miRNA)	35 - UCGAUCGAUCACAAUCUUACAG - 56
Stem-loop(if miRNA)	--U       CUC              A    UGAGAUU   GAUCGAUCGAUGGG U    |||||||   |||||||||||||| A    AUUCUAA   CUAGCUAGCUACUC C GAC       -CA              U
Stem-loop sequence	UUGAGAUUCUCGAUCGAUCGAUGGGAUACUCUCAUCGAUCGAUCACAAUCUUACAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013875481.1	ncRNA:22   GACAUUCUAACACUAGCUAGCU   1   *|*|||||*||||||||||||* targets:1459   GUUUAAGAGUGUGAUCGAUCGC   1480 Target Full Sequence	2.0	PREDICTED: Brassica napus dof zinc finger protein DOF5.4-like (LOC106434613), mRNA	dof zinc finger protein DOF5.4-like(LOC106434613)	coding protein	psRNATarget
XM_013805607.1	ncRNA:22   GACAUUCUAACACUAGCUAGCU   1   ***|=||=*||||||||||||| targets:964   AGAUGAGGAUGUGAUCGAUCGA   985 Target Full Sequence	3.0	PREDICTED: Brassica napus protein MIZU-KUSSEI 1-like (LOC106366056), mRNA	protein MIZU-KUSSEI 1-like(LOC106366056)	coding protein	psRNATarget
XM_013800139.1	ncRNA:22   GACAUUCUAACACUAGCUAGCU   1   ***|=||=*||||||||||||| targets:1211   AGAUGAGGAUGUGAUCGAUCGA   1232 Target Full Sequence	3.0	PREDICTED: Brassica napus protein MIZU-KUSSEI 1-like (LOC106360526), mRNA	protein MIZU-KUSSEI 1-like(LOC106360526)	coding protein	psRNATarget