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BaseInfo

ncRNA ID	ath-miRf10677-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CACUCGACCAGGUGGUCGAGUGA - NA
Stem-loop(if miRNA)	-        AGG          A  U   CGA  G   C    GG GG         A AGAC ACUCGACC   UGGUCGAGUG AG GAU   AU ACU UCGU  U  UACUCGGCC G |||| ||||||||   |||||||||| || |||   || ||| ||||  |  ||||||||| UCUG UGAGCUGG   ACCAGCUCAU UC CUG   UG UGA AGCG  G  GUGAGCUGG A     G        GGG          A  -   AAG  G   -    GA UA         G
Stem-loop sequence	AGACACUCGACCAGGUGGUCGAGUGAAGUGAUCGAAUGACUCUCGUGGUGGUACUCGGCCAGAGGGUCGAGUGAUGAGGCGAAGUGGUGAAGUCCUAUACUCGACCAGGGGGUCGAGUGGUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT015478.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *=|||||||||||||||||*||| targets:102   AUACUCGACCACCUGGUCGUGUG   124 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *=|||||||||||||||||*||| targets:102   AUACUCGACCACCUGGUCGUGUG   124 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   ||||||||||||||*|||||||* targets:263   UCACUCGACCACCUUGUCGAGUA   285 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *|||||||||*|||||||||||* targets:124   CCACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   ||||||||||||||*|||||||* targets:638   UCACUCGACCACCUUGUCGAGUA   660 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *|||||||||*|||||||||||* targets:499   CCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   ||||||||||||||*|||||||* targets:638   UCACUCGACCACCUUGUCGAGUA   660 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *|||||||||*|||||||||||* targets:499   CCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   ||||||||||*|||||||||||* targets:1571   UCACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   |=||||||||*|||||||||||* targets:308   UUACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *|||||||||*|||||||||||* targets:230   CCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   AG-UGAGCUGGUGGACCAGCUCAC   1   ||-||||||||*|||||||||||* targets:180   UCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *|||||||||*|||||||||||* targets:230   CCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   AG-UGAGCUGGUGGACCAGCUCAC   1   ||-||||||||*|||||||||||* targets:180   UCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *|||||||||*|||||||||||* targets:90   CCACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:23   AGUGAGCUGGUGGACCAGCUCAC   1   *||||||||||||*||||||||* targets:449   CCACUCGACCACCAGGUCGAGUA   471 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   AGUGAGCUGGUGGACC-AGCUCAC   1   ||||||||||||||||-||||||| targets:830   UCACUCGACCACCUGGGUCGAGUG   853 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget