Search result

BaseInfo

ncRNA ID	novel_bna_miR1313
Species	Brassica napus
Class	miRNA
Genome position	ChrC3:29348810-29348893 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR521271;SRR524726;SRR527229
Length	21
Mature sequence(if miRNA)	1 - AACCCAAGAGCAAGAACCCCC - 21
Stem-loop(if miRNA)	--        C                     AAUCAUC    AA   GGGUUCUU CUCUUGGGUUCUUAAAACACA       AUGU  U   |||||||| |||||||||||||||||||||       ||||   CCCAAGAA GAGAACCCAAGAAUUUUGUGU       UACA  A CC        C                     ------A    AA
Stem-loop sequence	GGGUUCUUCCUCUUGGGUUCUUAAAACACAAAUCAUCAUGUAAUAAAACAUAUGUGUUUUAAGAACCCAAGAGCAAGAACCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013894647.1	ncRNA:21   CCCCCAAGAACGAGAACCCAA   1   *||||||||||=||||||||| targets:1555   UGGGGUUCUUGUUCUUGGGUU   1575 Target Full Sequence	1.5	PREDICTED: Brassica napus myosin-binding protein 7-like (LOC106452504), transcript variant X2, mRNA	myosin-binding protein 7-like(LOC106452504)	coding protein	psRNATarget
XM_013894646.1	ncRNA:21   CCCCCAAGAACGAGAACCCAA   1   *||||||||||=||||||||| targets:1635   UGGGGUUCUUGUUCUUGGGUU   1655 Target Full Sequence	1.5	PREDICTED: Brassica napus myosin-binding protein 7-like (LOC106452504), transcript variant X1, mRNA	myosin-binding protein 7-like(LOC106452504)	coding protein	psRNATarget