Search result

BaseInfo

ncRNA ID novel_bna_miR1309
Species Brassica napus
Class miRNA
Genome position ChrC2:19503262-19503341 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR521271
Length 21
Mature sequence(if miRNA) 60 - ACCCCACUCCUAAGAACCCAC - 80
Stem-loop(if miRNA) --A                -                   A
   GGUUCUUAGGGGUGGG UUCUUAGCGUAAUUUAAGA C
   |||||||||||||||| ||||||||||||||||||| C
   CCAAGAAUCCUCACCC AAGAAUCGUAUUAAAUUUU G
CAC                C                   U
Stem-loop sequence AGGUUCUUAGGGGUGGGUUCUUAGCGUAAUUUAAGAACCGUUUUUAAAUUAUGCUAAGAACCCCACUCCUAAGAACCCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013842633.1
ncRNA:21   CACCCAAGAAUCCUCACCCCA   1
  *||*||||*||||||||||||
targets:2187   UUGCGUUCGUAGGAGUGGGGU   2207

2.5 PREDICTED: Brassica napus receptor-like protein kinase FERONIA (LOC106402002), mRNA receptor-like protein kinase FERONIA(LOC106402002) coding protein psRNATarget