ncRNA ID | novel_bna_miR1309 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC2:19503262-19503341 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR521271 |
Length | 21 |
Mature sequence(if miRNA) | 60 - ACCCCACUCCUAAGAACCCAC - 80 |
Stem-loop(if miRNA) |
--A                -                   A    GGUUCUUAGGGGUGGG UUCUUAGCGUAAUUUAAGA C    |||||||||||||||| ||||||||||||||||||| C    CCAAGAAUCCUCACCC AAGAAUCGUAUUAAAUUUU G CAC                C                   U |
Stem-loop sequence | AGGUUCUUAGGGGUGGGUUCUUAGCGUAAUUUAAGAACCGUUUUUAAAUUAUGCUAAGAACCCCACUCCUAAGAACCCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013842633.1 |
|
2.5 | PREDICTED: Brassica napus receptor-like protein kinase FERONIA (LOC106402002), mRNA | receptor-like protein kinase FERONIA(LOC106402002) | coding protein | psRNATarget |