ncRNA ID | novel_bna_miR1301 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA5:23041120-23041328 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR521271 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AAAUCCUAAACUCUAAACCAUA - 22 |
Stem-loop(if miRNA) |
--     C                   AAUAAAUAA          --C    AC      ------       -         AU            AUU     A GG U   AAAUC UAAACUCUAAACCAUAAAU         UAAACCAUAA   CCAA  CCUAAA      AUUAUAA CUUUAAACC  AAACUCUAAAUC   GAUCU G  U U   ||||| |||||||||||||||||||         ||||||||||   ||||  ||||||      ||||||| |||||||||  ||||||||||||   ||||| |  | A   UUUGG AUUUGAGAUUUGGUAUUUA         AUUUGGUAUU   GGUU  GGAUUU      UAAUAUU GGGAUUUGG  UUUGAGAUUUGG   UUAGA U  G G GA     A                   -------AA          UUC    GA      GAGAUU       U         GU            GAU     A UU G |
Stem-loop sequence | AAAUCCUAAACUCUAAACCAUAAAUAAUAAAUAAUAAACCAUAACCCAAACCCUAAAAUUAUAACUUUAAACCAUAAACUCUAAAUCAUUGAUCUAGGGUUUAGGGUUUAAGAUUUAGGGUUUAGAGUUUUGGGUUUAGGGUUUAUAAUUUAGAGUUUAGGAGUUGGCUUUUAUGGUUUAAAAUUUAUGGUUUAGAGUUUAAGGUUUAG |