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BaseInfo

ncRNA ID	novel_bna_miR1298
Species	Brassica napus
Class	miRNA
Genome position	ChrA2:30490277-30490332 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR2015555
Length	24
Mature sequence(if miRNA)	33 - AGAGGAAAAAAUGGAGUAGGGAUG - 56
Stem-loop(if miRNA)	--            A  CA      CUU   UCCUUACUCCAU UU  CUUUUA   C   |||||||||||| ||  ||||||   AGGGAUGAGGUA AA  GGAGAU   A GU            A  AA      UUU
Stem-loop sequence	UCCUUACUCCAUAUUCACUUUUACUUCAUUUUAGAGGAAAAAAUGGAGUAGGGAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013789828.1	ncRNA:24   GUAGGGAUGAGGUAAAAAAGGAGA   1   |||||||||||||||||||=|||| targets:2196   CAUCCCUACUCCAUUUUUUUCUCU   2219 Target Full Sequence	1.5	PREDICTED: Brassica napus transmembrane and coiled-coil domain-containing protein 4-like (LOC106349836), transcript variant X1, mRNA	transmembrane and coiled-coil domain-containing protein 4-like(LOC106349836)	coding protein	psRNATarget
XM_013832964.1	ncRNA:24   GUAGGGAUGAGGUAAAAAAGGAGA   1   |||==||||||||||||||=|||* targets:1393   CAUUUCUACUCCAUUUUUUUCUCG   1416 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106392173 (LOC106392173), mRNA	uncharacterized LOC106392173(LOC106392173)	coding protein	psRNATarget
XM_013832945.1	ncRNA:24   GUAGGGAUGAGGUAAAAAAGGAGA   1   |||==||||||||||||||=|||* targets:1393   CAUUUCUACUCCAUUUUUUUCUCG   1416 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106392151 (LOC106392151), transcript variant X3, mRNA	uncharacterized LOC106392151(LOC106392151)	coding protein	psRNATarget
XM_013832938.1	ncRNA:24   GUAGGGAUGAGGUAAAAAAGGAGA   1   |||==||||||||||||||=|||* targets:1393   CAUUUCUACUCCAUUUUUUUCUCG   1416 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106392151 (LOC106392151), transcript variant X2, mRNA	uncharacterized LOC106392151(LOC106392151)	coding protein	psRNATarget
XM_013832934.1	ncRNA:24   GUAGGGAUGAGGUAAAAAAGGAGA   1   |||==||||||||||||||=|||* targets:1393   CAUUUCUACUCCAUUUUUUUCUCG   1416 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106392151 (LOC106392151), transcript variant X1, mRNA	uncharacterized LOC106392151(LOC106392151)	coding protein	psRNATarget
XM_013878076.1	ncRNA:24   GUAGGGAUGAGGUAAAAAAGGAGA   1   |||==||*|||||||||*|||||| targets:15   CAUUUCUUCUCCAUUUUAUCCUCU   38 Target Full Sequence	2.5	PREDICTED: Brassica napus serine carboxypeptidase-like 47 (LOC106437156), mRNA	serine carboxypeptidase-like 47(LOC106437156)	coding protein	psRNATarget