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BaseInfo

ncRNA ID novel_bna_miR1295
Species Brassica napus
Class miRNA
Genome position ChrA2:20064027-20064125 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 23
Mature sequence(if miRNA) 77 - UAUGGAGUGGGAAAUGGAGUAGG - 99
Stem-loop(if miRNA) --A       A              --AAAAU  ACUCCAUAAAUGGAGU
   ACUCCAU UCUCACUCCAUAAU       UU                A
   ||||||| ||||||||||||||       ||                A
   UGAGGUA AGGGUGAGGUAUUA       AC                U
GGA       A              CCUCACU  UUGUUUGUUUUUUAUU
Stem-loop sequence AACUCCAUAUCUCACUCCAUAAUAAAAUUUACUCCAUAAAUGGAGUAAUUUAUUUUUUGUUUGUUCAUCACUCCAUUAUGGAGUGGGAAAUGGAGUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013854972.1
ncRNA:23   GGAUGAGGUAAAGGGUGAGGUAU   1
  =||-|||||||||||||||=||=
targets:1198   UCU-CUCCAUUUCCCACUCUAUG   1219

2.5 PREDICTED: Brassica napus GDSL esterase/lipase At5g33370-like (LOC106414292), mRNA GDSL esterase/lipase At5g33370-like(LOC106414292) coding protein psRNATarget