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BaseInfo

ncRNA ID	novel_bna_miR1294
Species	Brassica napus
Class	miRNA
Genome position	ChrA3:1087059-1087265 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495
Length	24
Mature sequence(if miRNA)	184 - AUGGAGUGGGAAAUGGAGUAAUGA - 207
Stem-loop(if miRNA)	--                                      -                       -----------------A  U     -ACCC        A    ACCCC   AUGGAGUGGGAAAUGGAGUAAUGAACAAAAAAUAAAAG AUUACUCCAUUUAUAGAGUAAGA                  CA CUCCA     CACUCCAU UUUU     C   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||                  || |||||     |||||||| ||||     A   UACCUCAUCCUUUACCUCAUUACUUGUUUUUUAUUUUC UAAUGAGGUAAAUAUCUCAUUUU                  GU GAGGU     GUGAGGUA AAAA     A UU                                      C                       GAAAAUAAAAAACAAGUA  -     AAACU        A    GAUAA
Stem-loop sequence	AUGGAGUGGGAAAUGGAGUAAUGAACAAAAAAUAAAAGAUUACUCCAUUUAUAGAGUAAGAACAUCUCCAACCCCACUCCAUAUUUUACCCCCAAAAUAGAAAAAAUGGAGUGUCAAAUGGAGUGAUGAACAAAAAAUAAAAGUUUUACUCUAUAAAUGGAGUAAUCCUUUUAUUUUUUGUUCAUUACUCCAUUUCCUACUCCAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013854972.1	ncRNA:24   AGUAAUGAGGUAAAGGGUGAGGUA   1   ||||**|||||||||||||||=|| targets:1195   UCAUCUCUCCAUUUCCCACUCUAU   1218 Target Full Sequence	2.5	PREDICTED: Brassica napus GDSL esterase/lipase At5g33370-like (LOC106414292), mRNA	GDSL esterase/lipase At5g33370-like(LOC106414292)	coding protein	psRNATarget
XM_013855946.1	ncRNA:24   AGUA-----AUGAGGUAAAGGGUGAGGUA   1   |==|-----||=||=*||||||||||||| targets:1643   UUGUAAGGGUAUUCUCUUUCCCACUCCAU   1671 Target Full Sequence	3.0	PREDICTED: Brassica napus trafficking protein particle complex II-specific subunit 120 homolog (LOC106415289), mRNA	trafficking protein particle complex II-specific subunit 120 homolog(LOC106415289)	coding protein	psRNATarget
XM_013812645.1	ncRNA:24   AGUA-----AUGAGGUAAAGGGUGAGGUA   1   |==|-----||=||=*||||||||||||| targets:1623   UUGUAAGGCUAUUCUCUUUCCCACUCCAU   1651 Target Full Sequence	3.0	PREDICTED: Brassica napus trafficking protein particle complex II-specific subunit 120 homolog (LOC106372434), mRNA	trafficking protein particle complex II-specific subunit 120 homolog(LOC106372434)	coding protein	psRNATarget