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BaseInfo

ncRNA ID novel_bna_miR1293
Species Brassica napus
Class miRNA
Genome position ChrC8:33399998-33400079 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 59 - AACUAAAAAAAGCUAAGAACCGGU - 82
Stem-loop(if miRNA) --          A       AC  G      AA   CCCCCA
  AACUAAAAAA GCUAAGA  CG UUCUUA  AAC      A
  |||||||||| |||||||  || ||||||  |||
  UUGAUUUUUU CGAUUCU  GC GAGAAU  UUG      U
AA          -       CU  A      -C   UACUAA
Stem-loop sequence AACUAAAAAAAGCUAAGAACCGGUUCUUAAAAACCCCCCAAUAAUCAUGUUCUAAGAGACGUCUCUUAGCUUUUUUAGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013811649.1
ncRNA:24   UGGCCAAGA-AUCGAAAAAAAUCAA   1
  *|=*|||||-|||||||||||||||
targets:1477   UCUUGUUCUGUAGCUUUUUUUAGUU   1501

2.0 PREDICTED: Brassica napus uncharacterized LOC106371567 (LOC106371567), mRNA uncharacterized LOC106371567(LOC106371567) coding protein psRNATarget