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BaseInfo

ncRNA ID novel_bna_miR1287
Species Brassica napus
Class miRNA
Genome position ChrA1:2393351-2393536 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 1 - AUAUGGAGUGGGGUUGGAGAUGCC - 24
Stem-loop(if miRNA) --                                   GAAA           A                            AC         U
  CAUCUCCAACCCCACUCCAUAUUUUACUCCAAAAU    AAAAUGGAGUG GAAAUGGAGUGAUGAACAAAAAAUAAAA  AUUACUCUA A
  |||||||||||||||||||||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||||  |||||||||
  GUAGAGGUUGGGGUGAGGUAUAAAAUGAGGUUUUA    UUUUACCUUAC CUUUACCUCAUUACUUGUUUUUUAUUUU  UAAUGAGGU A
CC                                   ACUC           C                            CC         A
Stem-loop sequence CAUCUCCAACCCCACUCCAUAUUUUACUCCAAAAUGAAAAAAAUGGAGUGAGAAAUGGAGUGAUGAACAAAAAAUAAAAACAUUACUCUAUAAAUGGAGUAAUCCUUUUAUUUUUUGUUCAUUACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGGGGUUGGAGAUGCC