ncRNA ID | novel_bna_miR1287 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA1:2393351-2393536 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUGGAGUGGGGUUGGAGAUGCC - 24 |
Stem-loop(if miRNA) |
--                                   GAAA           A                            AC         U   CAUCUCCAACCCCACUCCAUAUUUUACUCCAAAAU    AAAAUGGAGUG GAAAUGGAGUGAUGAACAAAAAAUAAAA  AUUACUCUA A   |||||||||||||||||||||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||||  |||||||||   GUAGAGGUUGGGGUGAGGUAUAAAAUGAGGUUUUA    UUUUACCUUAC CUUUACCUCAUUACUUGUUUUUUAUUUU  UAAUGAGGU A CC                                   ACUC           C                            CC         A |
Stem-loop sequence | CAUCUCCAACCCCACUCCAUAUUUUACUCCAAAAUGAAAAAAAUGGAGUGAGAAAUGGAGUGAUGAACAAAAAAUAAAAACAUUACUCUAUAAAUGGAGUAAUCCUUUUAUUUUUUGUUCAUUACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGGGGUUGGAGAUGCC |