ncRNA ID | novel_bna_miR1286 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC6:18229990-18230051 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 39 - AAGUUGAUCUUUAGGCAUUUCUCA - 62 |
Stem-loop(if miRNA) |
--A     A    U         -----U    C    AGUUG UCUU AGGCAUUUC      CACC A    ||||| |||| |||||||||      |||| C    UCAAC AGAG UUCGUAAAG      GUGG A CUC     -    -         UAUUUU    A |
Stem-loop sequence | AAGUUGAUCUUUAGGCAUUUCUCACCCACAAGGUGUUUUAUGAAAUGCUUGAGACAACUCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013853516.1 |
|
2.0 | PREDICTED: Brassica napus uncharacterized ATP-dependent helicase MPN_020-like (LOC106412595), mRNA | uncharacterized ATP-dependent helicase MPN_020-like(LOC106412595) | coding protein | psRNATarget |