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BaseInfo

ncRNA ID novel_bna_miR1282
Species Brassica napus
Class miRNA
Genome position ChrC6:1982004-1982073 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 1 - AACUAAAAAAAGCUAAGAACCGGU - 24
Stem-loop(if miRNA) --          A C      C           UA
  AACUAAAAAA G UAAGAA CGGUUCUUAAA  A
  |||||||||| | |||||| |||||||||||  A
  UUGAUUUUUU C AUUUUU GCCGAGAAUUU  A
AA          - A      A           UG
Stem-loop sequence AACUAAAAAAAGCUAAGAACCGGUUCUUAAAUAAAAGUUUUAAGAGCCGAUUUUUAACUUUUUUAGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013811649.1
ncRNA:24   UGGCCAAGA-AUCGAAAAAAAUCAA   1
  *|=*|||||-|||||||||||||||
targets:1477   UCUUGUUCUGUAGCUUUUUUUAGUU   1501

2.0 PREDICTED: Brassica napus uncharacterized LOC106371567 (LOC106371567), mRNA uncharacterized LOC106371567(LOC106371567) coding protein psRNATarget