ncRNA ID | novel_bna_miR1280 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:330968-331055 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 65 - AGGGUUUAUGGUUUAGAGUUGAGA - 88 |
Stem-loop(if miRNA) |
-- UG G      G U    G             G      G U   U  A UUUAGG U UAGG UUUAAAUUUUAGG UUUAGG U U   |  | |||||| | |||| ||||||||||||| |||||| |   A  U AGAUUU G AUUU GGAUUUGAGAUUU GGAUUU A A AG GU G      G U    G             G      G G |
Stem-loop sequence | UUGAGUUUAGGGUUUAGGGUUUAAAUUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGAGUUUAGGGUUUAUGGUUUAGAGUUGAGA |