ncRNA ID | novel_bna_miR1275 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:15945563-15945740 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 155 - UCUUAGAGUAGGGUUCUUAGCGGA - 178 |
Stem-loop(if miRNA) |
--UU          C  C       ACCUUAUA    G           -CAC     CU   U   U    CAUU       UG ----A  C     CUAAGAACCC AC CUAAGAA        UAAU AUGGUCUAAGA    ACAAG  CGG AUA GAUG    AGGAAAG  G     GC U     |||||||||| || |||||||        |||| |||||||||||    |||||  ||| ||| ||||    |||||||  |     || A     GAUUCUUGGG UG GAUUCUU        AUUA UACCAGAUUCU    UGUUU  GCU UAU CUAC    UUCUUUC  U     CG C AGGC          A  A       AGUACCCA    G           CAAA     -U   -   C    ----       GU GCAUC  U |
Stem-loop sequence | UUCUAAGAACCCCACCCUAAGAAACCUUAUAUAAUGAUGGUCUAAGACACACAAGCUCGGUAUAUGAUGCAUUAGGAAAGUGGAGCCUACUGCCUACGUUGCUUUCUUCAUCCUAUUCGUUUUGUAAACUCUUAGACCAUGAUUAACCCAUGAUUCUUAGAGUAGGGUUCUUAGCGGA |