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BaseInfo

ncRNA ID novel_bna_miR1275
Species Brassica napus
Class miRNA
Genome position ChrC5:15945563-15945740 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 155 - UCUUAGAGUAGGGUUCUUAGCGGA - 178
Stem-loop(if miRNA) --UU          C  C       ACCUUAUA    G           -CAC     CU   U   U    CAUU       UG ----A  C
    CUAAGAACCC AC CUAAGAA        UAAU AUGGUCUAAGA    ACAAG  CGG AUA GAUG    AGGAAAG  G     GC U
    |||||||||| || |||||||        |||| |||||||||||    |||||  ||| ||| ||||    |||||||  |     || A
    GAUUCUUGGG UG GAUUCUU        AUUA UACCAGAUUCU    UGUUU  GCU UAU CUAC    UUCUUUC  U     CG C
AGGC          A  A       AGUACCCA    G           CAAA     -U   -   C    ----       GU GCAUC  U
Stem-loop sequence UUCUAAGAACCCCACCCUAAGAAACCUUAUAUAAUGAUGGUCUAAGACACACAAGCUCGGUAUAUGAUGCAUUAGGAAAGUGGAGCCUACUGCCUACGUUGCUUUCUUCAUCCUAUUCGUUUUGUAAACUCUUAGACCAUGAUUAACCCAUGAUUCUUAGAGUAGGGUUCUUAGCGGA