ncRNA ID | novel_bna_miR1274 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:31190406-31190456 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 21 |
Mature sequence(if miRNA) | 31 - UCCAUAAUUAGGUUGUUGGUA - 51 |
Stem-loop(if miRNA) |
--     -C   CC      -    CU   CCAAC  CCU  AUUAUG AGUU  C   |||||  |||  |||||| ||||   GGUUG  GGA  UAAUAC UCAA  U AU     UU   -U      C    UC |
Stem-loop sequence | CCAACCCCUCCAUUAUGAGUUCUCUCUAACUCCAUAAUUAGGUUGUUGGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013790150.1 |
|
0.0 | PREDICTED: Brassica napus uncharacterized LOC106350242 (LOC106350242), mRNA | uncharacterized LOC106350242(LOC106350242) | coding protein | psRNATarget | |||||||||
XM_013813606.1 |
|
1.0 | PREDICTED: Brassica napus uncharacterized LOC106373435 (LOC106373435), mRNA | uncharacterized LOC106373435(LOC106373435) | coding protein | psRNATarget |