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BaseInfo

ncRNA ID novel_bna_miR1262
Species Brassica napus
Class miRNA
Genome position ChrC2:34682439-34682510 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 25
Mature sequence(if miRNA) 48 - AACUAAAAAAAACUAAGAACCGGUU - 72
Stem-loop(if miRNA) --           A    G            UAAAG
  AACUAAAAAAA CUAA AACCGGUUUUUA     U
  ||||||||||| |||| ||||||||||||     C
  UUGAUUUUUUU GAUU UUGGCCAAGAAU     U
AA           -    A            UUAUU
Stem-loop sequence AACUAAAAAAAACUAAGAACCGGUUUUUAUAAAGUCUUUAUUUAAGAACCGGUUAUUAGUUUUUUUAGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013884985.1
ncRNA:25   UUGGCCAAGAAUCAAAAAAAAUCAA   1
  |=*||*||||||||||||*||||||
targets:2   AGACGUUUCUUAGUUUUUCUUAGUU   26

1.5 PREDICTED: Brassica napus putative lipid-binding protein AIR1 (LOC106443416), mRNA putative lipid-binding protein AIR1(LOC106443416) coding protein psRNATarget