ncRNA ID | novel_bna_miR1258 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC2:22907452-22907519 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUUUACAUGGAAGUCGUCUCA - 21 |
Stem-loop(if miRNA) |
--                   CAAA      U   U   AUUUACAUGGAAGUCGUCU    AUUUUU UUU A   |||||||||||||||||||    |||||| |||   UGAAUGUACCUUCAGCAGG    UAGAAA AAA A GC                   ----      C   C |
Stem-loop sequence | AUUUACAUGGAAGUCGUCUCAAAAUUUUUUUUUUAACAAACAAAGAUGGACGACUUCCAUGUAAGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013834115.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106393415 (LOC106393415), mRNA | uncharacterized LOC106393415(LOC106393415) | coding protein | psRNATarget | |||||||||
XM_013813326.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106373103 (LOC106373103), mRNA | uncharacterized LOC106373103(LOC106373103) | coding protein | psRNATarget |