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BaseInfo

ncRNA ID	ath-miRf10671-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - ACUCGACCUCGUGGUCGAGUGGUG - NA
Stem-loop(if miRNA)	GAU    A            U      G   U   G GAAGUGGU      ----UU          U    GAGG CACUCGACCUCG GGUCGA UGG GAG U        GAUUUC      CUACUCGACC G    |||| |||||||||||| |||||| ||| ||| |        ||||||      ||||||||||    UUUC GUGAGCUGGGGC CCAGCU AUC CUC A        CUAGAG      GGUGAGCUGG G CAG    -            U      G   -   G ----AGUU      UUCUCU          G
Stem-loop sequence	GAUGAGGACACUCGACCUCGUGGUCGAGUGGUGAGGUGAAGUGGUGAUUUCUUCUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUAGUCGACCUCGGGGUCGAGUGCUUUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_103391.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   |||||||||||||||||||||||| targets:1148   CACCACUCGACCACGAGGUCGAGU   1171 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   *||||||||||||||||||||||| targets:1524   AACCACUCGACCACGAGGUCGAGU   1547 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   ||=|||||||||*||||||||||| targets:1615   CAUCACUCGACCCCGAGGUCGAGU   1638 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   ||||||||||||*||||||||||| targets:852   CACCACUCGACCCCGAGGUCGAGU   875 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183194.1	ncRNA:24   GUG--GUGAGCUGGUGCUCCAGCUCA   1   |||--||||||||||=|||||||||| targets:512   CACUUCACUCGACCAUGAGGUCGAGU   537 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   *|||||||||||||*||||||||| targets:447   AACCACUCGACCACCAGGUCGAGU   470 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   ==*||||||||||||=|||||||| targets:1921   UGGCACUCGACCACGGGGUCGAGU   1944 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   *=*|||||||||*||||||||||| targets:1862   AGGCACUCGACCUCGAGGUCGAGU   1885 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:24   GUG-GUGAGCUGGUGCUCCAGCUCA   1   =||-|||||*||||*|||||||||| targets:572   UACUCACUCUACCAAGAGGUCGAGU   596 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   ||||||||*|||||*||||||||| targets:42   CACCACUCAACCACAAGGUCGAGU   65 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   GUGGUGAGCUGGUGCUCCAGCUCA   1   |||=||||*||||||*|||||||| targets:640   CACUACUCAACCACGUGGUCGAGU   663 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget