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BaseInfo

ncRNA ID novel_bna_miR1255
Species Brassica napus
Class miRNA
Genome position ChrC1:33575749-33575893 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 1 - AUCUUUAGAACUCCAAUGGGUAGA - 24
Stem-loop(if miRNA) --                                                         GUAGGUGUGGG      UA
  UACCCAUUGGAGUUCUAAAGAUUCAUAUGUGUAUAAGUAUAUGUUGUAUAUGUGUAU           GUCCAU  U
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||
  AUGGGUAACCUCAAGAUUUCUAAGUAUACACAUAUUCAUAUACAACAUAUACACAUA           CAGGUG  U
AG                                                         -----------      UU
Stem-loop sequence UACCCAUUGGAGUUCUAAAGAUUCAUAUGUGUAUAAGUAUAUGUUGUAUAUGUGUAUGUAGGUGUGGGGUCCAUUAUUUUGUGGACAUACACAUAUACAACAUAUACUUAUACACAUAUGAAUCUUUAGAACUCCAAUGGGUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013814934.1
ncRNA:24   AGAUGGGUAACCUCAAGAUUUCUA   1
  |*|||||||||||||||||||*||
targets:823   UAUACCCAUUGGAGUUCUAAAAAU   846

1.5 PREDICTED: Brassica napus ethylene-responsive transcription factor ERF023-like (LOC106375033), mRNA ethylene-responsive transcription factor ERF023-like(LOC106375033) coding protein psRNATarget