ncRNA ID | novel_bna_miR1249 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:1228806-1228996 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 168 - GACUCGGGUAGAAAUGGACGGGCA - 191 |
Stem-loop(if miRNA) |
--   U    U    A   -A    CACAAC   --    AGC            GAUCGUCGU      UUCUCU   -   ----        -   -  G  C   GAC CGGG AGAA UGG  CGGG      CCG  CGUC   CAACCCGCGUCG         CGAGGA      GCC AUG    CGCGCGGG UGG GC AU C   ||| |||| |||| |||  ||||      |||  ||||   ||||||||||||         ||||||      ||| |||    |||||||| ||| || || U   UUG GCCC UCUU ACU  GCCC      GGC  GCAG   GUUGGGCGCAGU         GCUUCU      CGG UAU    GUGCGCCC GCC CG UG G GG   C    C    -   GC    AACCAC   UA    --A            ---------      CUUCCU   C   CUAA        U   U  G  C |
Stem-loop sequence | GACUCGGGUAGAAAUGGACGGGCACAACCCGCGUCAGCCAACCCGCGUCGGAUCGUCGUCGAGGAUUCUCUGCCAUGCGCGCGGGUGGGCGAUCCUGCGUGGCUCCGUCCCGCGUGAAUCUAUCGGCUCCUUCUCUUCGUGACGCGGGUUGAGACGAUCGGCACCAACCCGCGUCAUUCUCCCCGCGUUGG |