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BaseInfo

ncRNA ID novel_bna_miR1248
Species Brassica napus
Class miRNA
Genome position ChrA9:11452279-11452430 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 1 - CAUUGGAUUUUUAGUUGAGGGUUU - 24
Stem-loop(if miRNA) -                  AU                    UAGUU                         UAAA
 AACCCUCAACUAAAAAUC  GUGAAAUAAACCCUCAACUU     CCGUUAACAUAUGUUACCCUCCGUC    A
 ||||||||||||||||||  ||||||||||||||||||||     |||||||||||||||||||||||||    A
 UUGGGAGUUGAUUUUUAG  UACUUUAUUUGGGAGUUGAA     GGCAAUUGUAUACAGUGGGAGGCAG    A
U                  GU                    UAUUU                         UGCC
Stem-loop sequence AACCCUCAACUAAAAAUCAUGUGAAAUAAACCCUCAACUUUAGUUCCGUUAACAUAUGUUACCCUCCGUCUAAAAAACCGUGACGGAGGGUGACAUAUGUUAACGGUUUAUAAGUUGAGGGUUUAUUUCAUUGGAUUUUUAGUUGAGGGUUU