ncRNA ID | novel_bna_miR1247 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:20479674-20479725 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 23 |
Mature sequence(if miRNA) | 30 - ACAUAUUUAUGUAGAGUUUGGCA - 52 |
Stem-loop(if miRNA) |
--      ---U         UUU   AG   ACAUAU    UAUGUAGAG   GGC  A   ||||||    |||||||||   |||   UGUGUA    GUACAUCUC   UCG  G CC      CAGU         ---   AA |
Stem-loop sequence | ACAUAUUUAUGUAGAGUUUGGCAGAGAAGCUCUCUACAUGUGACAUGUGUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013800840.1 |
|
2.5 | PREDICTED: Brassica napus serine hydroxymethyltransferase 3, chloroplastic-like (LOC106361137), mRNA | serine hydroxymethyltransferase 3, chloroplastic-like(LOC106361137) | coding protein | psRNATarget |