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BaseInfo

ncRNA ID ath-miRf10670-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUCCUGAGUACUCUCUUCCA - NA
Stem-loop(if miRNA) GGAUUUG       UA           GU   -U        U
       UCCUGAG  CUCUCUUCCAA  UUA  UCACACAG G
       |||||||  |||||||||||  |||  ||||||||
       AGGACUC  GGGAGGGGGUU  AAU  AGUGUGUC G
UGUGUGA       --           UG   UU        A
Stem-loop sequence GGAUUUGUCCUGAGUACUCUCUUCCAAGUUUAUUCACACAGUGGACUGUGUGAUUUAAGUUUGGGGGAGGGCUCAGGAAGUGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230139.1
ncRNA:20   ACCUUCUCUCAUGAGUCCUG   1
  ||||||||||||||||||||
targets:1179   UGGAAGAGAGUACUCAGGAC   1198

0.0 Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL22-82-O04 NA coding protein psRNATarget
NM_102697.1
ncRNA:20   ACCUUCUCUCAUGAGUCCUG   1
  |||||*|||||||||||||*
targets:405   UGGAAUAGAGUACUCAGGAG   424

2.0 Arabidopsis thaliana Zinc finger C-x8-C-x5-C-x3-H type family protein partial mRNA Zinc finger C-x8-C-x5-C-x3-H type family protein(AT1G29570) coding protein psRNATarget
NM_102696.3
ncRNA:20   ACCUUCUCUCAUGAGUCCUG   1
  ||*||*|||||||||||||=
targets:1167   UGAAAUAGAGUACUCAGGAU   1186

3.0 Arabidopsis thaliana Zinc finger C-x8-C-x5-C-x3-H type family protein mRNA Zinc finger C-x8-C-x5-C-x3-H type family protein(AT1G29560) coding protein psRNATarget
NM_001123908.1
ncRNA:20   ACCUUCUCUCAUGAGUCCUG   1
  ||*||*|||||||||||||=
targets:1209   UGAAAUAGAGUACUCAGGAU   1228

3.0 Arabidopsis thaliana Zinc finger C-x8-C-x5-C-x3-H type family protein mRNA Zinc finger C-x8-C-x5-C-x3-H type family protein(AT1G29560) coding protein psRNATarget