ncRNA ID | novel_bna_miR1235 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA8:10512473-10512529 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGUGCAAAAAUAUAGAGACAGUA - 23 |
Stem-loop(if miRNA) |
--           A   A   A         AGUGCAAAAAU UAG GAC GUAACCG   ||||||||||| ||| ||| ||||||C   UCACGUUUUUA AUC CUG CAUUGGC UA           C   G   A       |
Stem-loop sequence | AGUGCAAAAAUAUAGAGACAGUAACCGCCGGUUACAGUCGCUACAUUUUUGCACUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013879299.1 |
|
3.0 | PREDICTED: Brassica napus arogenate dehydrogenase 1, chloroplastic (LOC106438203), mRNA | arogenate dehydrogenase 1, chloroplastic(LOC106438203) | coding protein | psRNATarget |