ncRNA ID | novel_bna_miR1232 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA7:3872098-3872166 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUUGGAUUUAGAGUUUACGGUUU - 24 |
Stem-loop(if miRNA) |
----------A            G  UAC    UG  UU            UUUGGAUUUAAG UU   AGUU  GU  A            |||||||||||| ||   ||||  ||  G            AGAUUUAGGUUU AG   UUAG  UA  G UUUGGCAUUUG            G  --U    GA  UA |
Stem-loop sequence | AUUUGGAUUUAAGGUUUACAGUUUGGUUUAGGAUAUAGGAUUUGAGUUUGGAUUUAGAGUUUACGGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013835759.1 |
|
2.0 | PREDICTED: Brassica napus calmodulin-like protein 6 (LOC106395246), mRNA | calmodulin-like protein 6(LOC106395246) | coding protein | psRNATarget | |||||||||
XM_013840385.1 |
|
2.0 | PREDICTED: Brassica napus calmodulin-like protein 6 (LOC106399946), mRNA | calmodulin-like protein 6(LOC106399946) | coding protein | psRNATarget |