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BaseInfo

ncRNA ID novel_bna_miR1228
Species Brassica napus
Class miRNA
Genome position ChrA7:8399023-8399146 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 23
Mature sequence(if miRNA) 102 - UGGAGGAUUCUUAGAGUGGGGUU - 124
Stem-loop(if miRNA) ---      A       AG   GG      G  AU          CUAUCUC         UU
   UGGAGG UUCUUAG  UGG  UUCUUA UG  AUAUAAGAAU       UUAGCUUUU  A
   |||||| |||||||  |||  |||||| ||  ||||||||||       |||||||||
   ACUUUC AAGAAUC  ACC  AAGAAU GC  UAUAUUCUUA       AAUUGAAAA  G
UUA      -       CU   UA      A  CU          AACAAAA         UU
Stem-loop sequence UGGAGGAUUCUUAGAGUGGGGUUCUUAGUGAUAUAUAAGAAUCUAUCUCUUAGCUUUUUUAGUUAAAAGUUAAAAAACAAAUUCUUAUAUUCCGAUAAGAAAUCCAUCCUAAGAACUUUCAAUU