Search result

BaseInfo

ncRNA ID	ath-miRf10668-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - CUCGACCUCGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)	U -UU           C            UCU   G   AUG C   CUACUCGACCU GGGGUCGAGUGG   CUU AGA ||| |   ||||||||||| ||||||||||||   ||| ||U UAC G   GGUGAGCUGGG CUCCAGCUCAUC   GAA UUC    U UUU           U            UUC   G
Stem-loop sequence	AUGUCUUCUACUCGACCUCGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUUCUACUCGACCUCUGGGUCGAGUGGUUUGUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   |||||||||||||||||||||| targets:853   ACCACUCGACCCCGAGGUCGAG   874 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   |=|||||||||||||||||||| targets:1616   AUCACUCGACCCCGAGGUCGAG   1637 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   |*|||||||||||||||||||* targets:1058   AGCACUCGACCCCGAGGUCGAC   1079 Target Full Sequence	1.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   ||||||||||||*||||||||| targets:762   ACCACUCGACCCAGAGGUCGAG   783 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   |||||||||||*|||||||||| targets:1525   ACCACUCGACCACGAGGUCGAG   1546 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   ||||||||||||||*||||||| targets:488   ACCACUCGACCCCGUGGUCGAG   509 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   |||||||||||||*|||||||| targets:1103   ACCACUCGACCCCCAGGUCGAG   1124 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   |||||||||||*|||||||||| targets:1149   ACCACUCGACCACGAGGUCGAG   1170 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   ||||||||||||||*||||||| targets:1208   ACCACUCGACCCCGUGGUCGAG   1229 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183005.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   =*|||||||||=|||||||||| targets:1863   GGCACUCGACCUCGAGGUCGAG   1884 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:22   UGGUGAGCUGGGGCUCCAGCUC   1   *|=||||||||||*|||||||| targets:186   UCUACUCGACCCCCAGGUCGAG   207 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget