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BaseInfo

ncRNA ID	novel_bna_miR1212
Species	Brassica napus
Class	miRNA
Genome position	ChrA6:40631655-40631787 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR2015555
Length	24
Mature sequence(if miRNA)	1 - UUUUCGGCUAAGAGACGGUUCUUA - 24
Stem-loop(if miRNA)	--U      C                   C    AUUUA      A                  UU    UUUCGG UAAGAGACGGUUCUUAUAU UUUU     AGAGAC GUUCUUAGCUUUUCUUAG  A    |||||| ||||||||||||||||||| ||||     |||||| ||||||||||||||||||  A    GAAGCC AUUCUCUGUCAAGAAUAUA AGGA     UUUCUG CAAGAAUUGAAAAGAAUC  A AUC      C                   A    GUCAA      C                  UA
Stem-loop sequence	UUUUCGGCUAAGAGACGGUUCUUAUAUCUUUUAUUUAAGAGACAGUUCUUAGCUUUUCUUAGUUAAAAUCUAAGAAAAGUUAAGAACCGUCUUUAACUGAGGAAAUAUAAGAACUGUCUCUUACCCGAAGCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013795090.1	ncRNA:24   AUUCUUGGCAGAGAAUCGGCUUUU   1   ||=--|=||||||||||||*|||| targets:578   UAG--AUCGUCUCUUAGCCAAAAA   599 Target Full Sequence	2.5	PREDICTED: Brassica napus glutathione S-transferase T3-like (LOC106355074), mRNA	glutathione S-transferase T3-like(LOC106355074)	coding protein	psRNATarget
XM_013889929.1	ncRNA:24   AUUCUUGGCAGAGAAUCGGCUUUU   1   ||=--|=||||||||||||*|||| targets:689   UAG--AUCGUCUCUUAGCCAAAAA   710 Target Full Sequence	2.5	PREDICTED: Brassica napus glutathione S-transferase T3-like (LOC106447990), mRNA	glutathione S-transferase T3-like(LOC106447990)	coding protein	psRNATarget
XM_013861214.1	ncRNA:24   AUUCUUGGCAGAGAAUCGGCUUUU   1   ||=--|=||||||||||||*|||| targets:689   UAG--AUCGUCUCUUAGCCAAAAA   710 Target Full Sequence	2.5	PREDICTED: Brassica napus glutathione S-transferase T3-like (LOC106420370), mRNA	glutathione S-transferase T3-like(LOC106420370)	coding protein	psRNATarget
XM_013795088.1	ncRNA:24   AUUCUUGGCAGAGAAUCGGCUUUU   1   ||=--|=||||||||||||*|||| targets:689   UAG--AUCGUCUCUUAGCCAAAAA   710 Target Full Sequence	2.5	PREDICTED: Brassica napus glutathione S-transferase T3-like (LOC106355072), mRNA	glutathione S-transferase T3-like(LOC106355072)	coding protein	psRNATarget
XM_013848876.1	ncRNA:24   AUUCUUGGCAGAGAAUCGGCUUUU   1   ||=--|=||||||||||||*|||| targets:689   UAG--AUCGUCUCUUAGCCAAAAA   710 Target Full Sequence	2.5	PREDICTED: Brassica napus glutathione S-transferase T3-like (LOC106408043), mRNA	glutathione S-transferase T3-like(LOC106408043)	coding protein	psRNATarget
XM_013884424.1	ncRNA:24   AUUCUUGGCAGAGAAUCGGCUUUU   1   ||=--|=||||||||||||*|||| targets:689   UAG--AUCGUCUCUUAGCCAAAAA   710 Target Full Sequence	2.5	PREDICTED: Brassica napus glutathione S-transferase T3-like (LOC106442779), mRNA	glutathione S-transferase T3-like(LOC106442779)	coding protein	psRNATarget
XM_013884412.1	ncRNA:24   AUUCUUGGCAGAGAAUCGGCUUUU   1   ||=--|=||||||||||||*|||| targets:689   UAG--AUCGUCUCUUAGCCAAAAA   710 Target Full Sequence	2.5	PREDICTED: Brassica napus glutathione S-transferase T3-like (LOC106442764), mRNA	glutathione S-transferase T3-like(LOC106442764)	coding protein	psRNATarget