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BaseInfo

ncRNA ID novel_bna_miR1207
Species Brassica napus
Class miRNA
Genome position ChrA5:23994092-23994152 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 38 - AGCUAGACGGCUAGAACUAGGGUU - 61
Stem-loop(if miRNA) -AGC      -          ---------    U
    UAGACG GCUAGAACUA         GGGU C
    |||||| ||||||||||         ||||
    AUUUGU CGGUCUUGAU         CUCA A
ACUC      U          GUUACAUAA    U
Stem-loop sequence AGCUAGACGGCUAGAACUAGGGUUCAUACUCAAUACAUUGUAGUUCUGGCUUGUUUACUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013888806.1
ncRNA:24   UUGGGAUCAAGAUCGGCAGAUCGA   1
  ||===|||*|||||*|||||||||
targets:48   AAUUUUAGGUCUAGGCGUCUAGCU   71

2.5 PREDICTED: Brassica napus senescence-associated protein 13-like (LOC106446966), transcript variant X2, mRNA senescence-associated protein 13-like(LOC106446966) coding protein psRNATarget
XM_013888805.1
ncRNA:24   UUGGGAUCAAGAUCGGCAGAUCGA   1
  ||===|||*|||||*|||||||||
targets:49   AAUUUUAGGUCUAGGCGUCUAGCU   72

2.5 PREDICTED: Brassica napus senescence-associated protein 13-like (LOC106446966), transcript variant X1, mRNA senescence-associated protein 13-like(LOC106446966) coding protein psRNATarget