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BaseInfo

ncRNA ID novel_bna_miR1204
Species Brassica napus
Class miRNA
Genome position ChrA5:30584498-30584565 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 1 - AACUAAAAAACUAAGAACCGGCUC - 24
Stem-loop(if miRNA) --          -       CC  C         
  AACUAAAAAA CUAAGAA  GG UCUUGAAUAA
  |||||||||| |||||||  || |||||||||G
  UUGAUUUUUU GAUUCUU  CC AGAAUUUAUA
AA          U       AA  A         
Stem-loop sequence AACUAAAAAACUAAGAACCGGCUCUUGAAUAAGAUAUUUAAGAACCAAUUCUUAGUUUUUUUAGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013810588.1
ncRNA:24   CUCGGCCAAGAAUCAAA-AAAUCAA   1
  |||--||||||||||||-|||||||
targets:1217   GAG--GGUUCUUAGUUUCUUUAGUU   1239

3.0 PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA putative auxin efflux carrier component 8(LOC106370582) coding protein psRNATarget