ncRNA ID | novel_bna_miR1201 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:22939461-22939591 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR2015555 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GAGACGGUUCUUAUAUUACGCUA - 23 |
Stem-loop(if miRNA) |
--                                                A A  C C          GCGUAAUAUAAGAACCGUCUCUUAACUUUUAACUAAGAAAAGCUAAGA C GA U UUAAAUAU   |||||||||||||||||||||||||||||||||||||||||||||||| | || | |||||||C   CGCAUUAUAUUCUUGGCAGAGAAUUGAAAAUUGAUUCUUUUUGAUUCU G CU A AAUUUAUU AU                                                C G  A A        |
Stem-loop sequence | GCGUAAUAUAAGAACCGUCUCUUAACUUUUAACUAAGAAAAGCUAAGAACAGACUCUUAAAUAUCUUAUUUAAAAAUCGGCUCUUAGUUUUUCUUAGUUAAAAGUUAAGAGACGGUUCUUAUAUUACGCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013800592.1 |
|
2.5 | PREDICTED: Brassica napus protein ASPARTIC PROTEASE IN GUARD CELL 1-like (LOC106360916), mRNA | protein ASPARTIC PROTEASE IN GUARD CELL 1-like(LOC106360916) | coding protein | psRNATarget |