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BaseInfo

ncRNA ID novel_bna_miR1200
Species Brassica napus
Class miRNA
Genome position ChrA4:29655718-29655868 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR2015555
Length 24
Mature sequence(if miRNA) 128 - UUAGAGUGAGGUUCUUAGCGGAAU - 151
Stem-loop(if miRNA) --    AG  AG                                        C    U       AU   UUAUU
  UUAG  UG  GUUCUUAGCGGAAUAUAAGAAUUCGUCUCUUAACUUUUAA UAAA AAAUUAA  AUC     U
  ||||  ||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||  |||     A
  AAUC  AC  CAAGAAUCGCUUUAUAUUUUUAGGCAGAGAAUUGAAAAUU AUUU UUUAGUU  UGG     A
AA    CU  CU                                        A    U       CU   CCGAA
Stem-loop sequence UUAGAGUGAGGUUCUUAGCGGAAUAUAAGAAUUCGUCUCUUAACUUUUAACUAAAUAAAUUAAAUAUCUUAUUUAAAAGCCGGUUCUUGAUUUUUUUAAUUAAAAGUUAAGAGACGGAUUUUUAUAUUUCGCUAAGAACUCCAUCCUAAAA