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BaseInfo

ncRNA ID	novel_bna_miR1198
Species	Brassica napus
Class	miRNA
Genome position	ChrA10:6055140-6055260 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR2015555
Length	24
Mature sequence(if miRNA)	1 - AAGAGACGGUUUCUUAUAUUCUGC - 24
Stem-loop(if miRNA)	--    A           A                                         A   GGAA UAUAAGAAACC UCUCUUAACUUUUAACUAAAAAAUUAAGAACCGGCUCUUAA U   |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||   UCUU AUAUUCUUUGG AGAGAAUUGAAAAUUGAUUUUUUAAUUCUUGGCCGAGAAUU A CG    -           C                                         U
Stem-loop sequence	GGAAAUAUAAGAAACCAUCUCUUAACUUUUAACUAAAAAAUUAAGAACCGGCUCUUAAAUAUUUAAGAGCCGGUUCUUAAUUUUUUAGUUAAAAGUUAAGAGACGGUUUCUUAUAUUCUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013825681.1	ncRNA:24   CGUCUUAUAUUCUUUGGCAGAGAA   1   *||-|||||||||||=|||||||| targets:44   CCA-AAUAUAAGAAAUCGUCUCUU   66 Target Full Sequence	1.5	PREDICTED: Brassica napus peroxiredoxin-2E, chloroplastic-like (LOC106385780), mRNA	peroxiredoxin-2E, chloroplastic-like(LOC106385780)	coding protein	psRNATarget
XM_013828335.1	ncRNA:24   CGUCUUAUA-UUCUUUGGCAGAGAA   1   *=*|||*||-||||||||||||||| targets:626   CUUGAAGAUCAAGAAACCGUCUCUU   650 Target Full Sequence	3.0	PREDICTED: Brassica napus transcription factor PIF4 (LOC106388298), mRNA	transcription factor PIF4(LOC106388298)	coding protein	psRNATarget