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BaseInfo

ncRNA ID novel_bna_miR1190
Species Brassica napus
Class miRNA
Genome position ChrC9:288050-288113 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 23
Mature sequence(if miRNA) 1 - UAGGAUUUAGUGUUUAGGGUUUA - 23
Stem-loop(if miRNA) --GAA      GG            G   UGA
     UUUAGA  UUAGGUUCUAGG UUU   U
     ||||||  |||||||||||| |||
     GGAUUU  GAUUUAGGAUUU GGA   C
AUUUG      GU            G   UUU
Stem-loop sequence GAAUUUAGAGGUUAGGUUCUAGGGUUUUGAUCUUUAGGGUUUAGGAUUUAGUGUUUAGGGUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013819934.1
ncRNA:23   AUUUGGGAUUUGUGAUUUAGGAU   1
  **||||||||||*|||||||||*
targets:67   ACAACCCUAAACUCUAAAUCCUC   89

2.5 PREDICTED: Brassica napus ethylene-responsive transcription factor ERF114-like (LOC106380120), mRNA ethylene-responsive transcription factor ERF114-like(LOC106380120) coding protein psRNATarget